News

Biocuration Conference 2024

02-14-2024

SABIO-RK will be presented in a talk at the 17th Annual International Biocuration Conference on March 5-8, 2024 in Faridabad (India).

Title:
Unlocking Bio-Curation: Harnessing Text Highlighting for Neural Named Entity Models of SABIO-RK database


SABIO-RK training

08-09-2023

Our next de.NBI training course
"Tools for Systems biology modeling and data exchange: COPASI, CellNetAnalyzer, SABIO-RK, FAIRDOMHub/SEEK"
will be in Magdeburg, Germany
from Tuesday, November 28th to Thursday, November 30th, 2023.

More details and registration on the de.NBI website:
Tools for systems biology modeling and data exchange




Talk at Biocuration Conference

04-04-2023

SABIO-RK will be presented in a lightning talk at the 16th Annual International Biocuration Conference on April 24-26, 2023 in Padua (Italy).

The presentation will highlight the new visualization of SABIO-RK data published recently:

Dorotea Dudaš, Ulrike Wittig, Maja Rey, Andreas Weidemann, Wolfgang Müller
Improved insights into the SABIO-RK database via visualization
Database
Volume 2023 (2023) baad011
https://doi.org/10.1093/database/baad011


SABIO-RK paper in "Database"

04-03-2023

The new visualization of SABIO-RK data is now published in the Database Journal.

To get a better overview about the multidimensional and complex data in SABIO-RK we developed a variety of visualization concepts in the SABIO-RK user interface. We use a heat map, parallel coordinates and scatter plots to allow the interactive visual exploration of general entry-based information of biochemical reactions and specific kinetic parameter values.

Dorotea Dudaš, Ulrike Wittig, Maja Rey, Andreas Weidemann, Wolfgang Müller
Improved insights into the SABIO-RK database via visualization
Database
Volume 2023 (2023) baad011
https://doi.org/10.1093/database/baad011