ELIXIR All Hands 2018
ELIXIR - de.NBI meeting 2018
Date: Mon 4 June 2018 to Thu 7 June 2018
Location: Berlin, Germany
Presentation of the main tools of the de.NBI SysBio node:
COPASI, CellNetAnalyzer, SABIO-RK and SEEK.
SABIO-RK at Biocuration 2018
Talk and poster presentation at the Biocuration Conference 2018
Date: 8-11th April, 2018
Location: Shanghai, China
STRENDA DB data in SABIO-RK
Now SABIO-RK includes direct submissions of STRENDA DB data.
STRENDA DB is a validation and storage system for enzyme function data that incorporates the STRENDA Guidelines. STRENDA stands for "Standards for Reporting Enzymology Data".
The aim of the STRENDA Guidelines is to improve the quality of data published in the scientific literature and to enable researchers to compare, evaluate, interpret and reproduce experimental research results published in the literature and databases.
Currently more than 50 international biochemistry journals already included the STRENDA Guidelines in their Instructions for Authors.
Details about STRENDA DB are published here.
SABIO-RK in de.NBI course
de.NBI course 'Tools for systems biology modeling and data management'
Date: April 24th-26th, 2018
Location: Magdeburg, Germany
Website: Tools for systems biology modeling and data management
New SABIO-RK paper
SABIO-RK update paper published in Database issue of Nucleic Acid Research:
More export formats supported
Besides SBML, SBBioPax and spreadsheet export, SABIO-RK supports now the export of kinetics data in a variety of additional formats including e.g. Matlab, BioPAX level 2 and level 3, DOT, Octave, XPP and SBGNML.