cy3sabiork - new Cytoscape app
cy3sabiork - an app for querying and visualization of kinetic data from SABIO-RK in Cytoscape
cy3sabiork is a Cytoscape 3 app for accessing kinetic information from SABIO-RK via the RESTful web services.
cy3sabiork creates an intuitive visualization of kinetic entries as a species-reaction-kinetics graph, which reflects the reaction-centered approach of SABIO-RK. Kinetic entries can be imported in SBML format from either the SABIO-RK web interface or via web services queries.
A SABIO-RK web services client is now implemented in Cytoscape and available from the Cytoscape app store at http://apps.cytoscape.org/apps/cy3sabiork. The source code is available at https://github.com/matthiaskoenig/cy3sabiork/.
cy3sabiork was developed by Matthias König.